STRINGSTRING
PBAL39_08000 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_08000" - Glucosylceramidase in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_08000Glucosylceramidase (480 aa)    
Predicted Functional Partners:
PBAL39_24203
Beta-galactosidase (821 aa)
 
 
    0.858
PBAL39_00627
Beta-galactosidase (959 aa)
   
 
    0.853
PBAL39_07995
B-glucosidase, glycoside hydrolase family 3 protein (766 aa)
 
    0.851
PBAL39_00240
Lactase (1196 aa)
     
 
    0.825
PBAL39_07990
Putative outer membrane protein (474 aa)
 
          0.787
PBAL39_13320
Glycosyl hydrolase (494 aa)
 
   
 
0.724
PBAL39_07985
Putative outer membrane protein (969 aa)
 
          0.610
PBAL39_15124
Glycoside hydrolase family 2, sugar binding protein (903 aa)
   
 
    0.606
PBAL39_23087
Beta-mannosidase (1016 aa)
   
 
    0.597
PBAL39_17249
Putative hydrolase (604 aa)
     
 
    0.583
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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