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PBAL39_08135 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_08135" - ABC transporter, ATP-binding/membrane-spanning protein in Pedobacter sp. BAL39
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_08135ABC transporter, ATP-binding/membrane-spanning protein (590 aa)    
Predicted Functional Partners:
PBAL39_08140
tRNA-uridine isomerase I ; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs (283 aa)
   
        0.900
PBAL39_01667
Sugar phosphate isomerase, KpsF/GutQ family protein (321 aa)
   
  0.861
lpxC
UDP-3-O-[R-3-hydroxymyristoyl]-N-acetylglucosamine deacetylase ; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis (469 aa)
 
 
  0.739
PBAL39_11662
ABC transporter, ATP-binding protein (205 aa)
   
  0.737
PBAL39_01802
Putative ABC transport system ATP-binding protein (221 aa)
0.677
PBAL39_20750
ABC transporter, ATP-binding protein (232 aa)
0.677
lolD
Lipoprotein-releasing system ATP-binding protein LolD ; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner (216 aa)
0.673
PBAL39_08145
Uncharacterized protein (134 aa)
              0.665
PBAL39_05208
ABC transporter, ATP-binding/permease protein (574 aa)
   
   
 
0.650
PBAL39_20630
Ankyrin (216 aa)
   
 
    0.650
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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