STRINGSTRING
PBAL39_08185 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_08185" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_08185Uncharacterized protein (140 aa)    
Predicted Functional Partners:
PBAL39_08190
Beta-glucosidase (445 aa)
              0.700
PBAL39_13467
Uncharacterized protein (315 aa)
   
          0.664
PBAL39_10526
Uncharacterized protein (475 aa)
   
          0.609
PBAL39_08195
DNA mismatch repair protein mutS (605 aa)
              0.606
PBAL39_06496
Uncharacterized protein (399 aa)
   
          0.598
PBAL39_10206
Uncharacterized protein (492 aa)
   
          0.586
PBAL39_09561
JmjC domain protein (293 aa)
   
          0.580
PBAL39_09556
JmjC domain protein (303 aa)
   
          0.556
PBAL39_06451
Universal stress protein (285 aa)
   
          0.512
PBAL39_09951
Uncharacterized protein (109 aa)
   
          0.507
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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