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PBAL39_08616 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_08616" - Putative lipoprotein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_08616Putative lipoprotein (337 aa)    
Predicted Functional Partners:
PBAL39_08621
Putative outer membrane protein (530 aa)
 
          0.969
PBAL39_08626
Uncharacterized protein (993 aa)
 
          0.944
PBAL39_08606
Putative alpha-amylase (592 aa)
 
          0.904
PBAL39_24223
Putative outer membrane protein (533 aa)
 
          0.851
PBAL39_12368
Putative outer membrane protein (508 aa)
 
          0.799
PBAL39_24228
Uncharacterized protein (992 aa)
 
          0.768
PBAL39_23107
Uncharacterized protein (202 aa)
   
          0.753
PBAL39_16776
Putative outer membrane protein (516 aa)
   
          0.679
PBAL39_00637
Putative outer membrane protein (550 aa)
   
          0.675
PBAL39_13315
Putative outer membrane protein (512 aa)
   
          0.655
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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