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EDM34342.1 protein (Pedobacter sp. BAL39) - STRING interaction network
"EDM34342.1" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM34342.1Uncharacterized protein; COG1409 Predicted phosphohydrolases (461 aa)    
Predicted Functional Partners:
EDM34344.1
annotation not available (471 aa)
 
          0.866
EDM34345.1
Probably involved in nutrient binding; COG1629 Outer membrane receptor proteins, mostly Fe transport (1072 aa)
 
          0.782
EDM36391.1
Histidine kinase; COG0642 Signal transduction histidine kinase (1198 aa)
       
  0.754
EDM33940.1
Sensor histidine kinase/response regulator fusion protein; COG0642 Signal transduction histidine kinase (1160 aa)
       
  0.754
EDM36487.1
Putative glycerophosphodiester phosphodiesterase; COG0584 Glycerophosphoryl diester phosphodiesterase (331 aa)
        0.730
EDM34343.1
annotation not available (517 aa)
              0.713
EDM37060.1
COG0646 Methionine synthase I (cobalamin-dependent), methyltransferase domain (1219 aa)
         
  0.650
EDM38004.1
Sensor histidine kinase with PAS signal sensor domains; COG2202 FOG- PAS/PAC domain (813 aa)
     
 
    0.589
purL
Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate (1222 aa)
   
 
    0.589
guaB
Inosine-5’-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5’-phosphate (IMP) to xanthosine 5’-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth; Belongs to the IMPDH/GMPR family (489 aa)
     
 
    0.587
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter sp. BAL39
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