STRINGSTRING
PBAL39_08796 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_08796" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_08796Uncharacterized protein (292 aa)    
Predicted Functional Partners:
PBAL39_08791
RNA polymerase, sigma-E factor heat shock and oxidative stress (183 aa)
 
          0.927
PBAL39_09896
Uncharacterized protein (309 aa)
   
          0.774
PBAL39_04323
Uncharacterized protein (1168 aa)
   
          0.763
PBAL39_17974
Uncharacterized protein (404 aa)
   
          0.746
PBAL39_17514
Uncharacterized protein (811 aa)
   
          0.738
PBAL39_24985
Uncharacterized protein (280 aa)
   
          0.734
PBAL39_09891
PKD (1990 aa)
   
          0.734
PBAL39_10311
Uncharacterized protein (217 aa)
   
          0.733
PBAL39_17954
Outer membrane protein (874 aa)
   
          0.728
PBAL39_14879
RNA polymerase, sigma-24 subunit, ECF subfamily protein (145 aa)
   
          0.728
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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