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EDM34387.1 protein (Pedobacter sp. BAL39) - STRING interaction network
"EDM34387.1" - COG0760 Parvulin-like peptidyl-prolyl isomerase in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM34387.1COG0760 Parvulin-like peptidyl-prolyl isomerase (454 aa)    
Predicted Functional Partners:
EDM34388.1
Methanol dehydrogenase regulator; COG0714 MoxR-like ATPases (320 aa)
              0.856
EDM35817.1
COG4775 Outer membrane protein/protective antigen OMA87 (829 aa)
   
 
  0.663
EDM34386.1
annotation not available (196 aa)
              0.660
EDM34581.1
COG0681 Signal peptidase I; Belongs to the peptidase S26 family (400 aa)
   
 
 
  0.630
EDM35816.1
Putative cationic 19 kDa outer membrane protein; COG2825 Outer membrane protein (176 aa)
 
 
  0.617
EDM33952.1
annotation not available (1009 aa)
   
          0.616
EDM38153.1
annotation not available (893 aa)
 
   
  0.599
EDM35762.1
Conserved hypothetical lipoprotein; COG4105 DNA uptake lipoprotein (309 aa)
   
 
  0.595
yidC
Membrane protein insertase YidC; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins (598 aa)
   
 
 
  0.578
EDM36289.1
COG5651 PPE-repeat proteins (7799 aa)
         
  0.559
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter sp. BAL39
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