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PBAL39_08896 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_08896" - Endonuclease/exonuclease/phosphatase family protein in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_08896Endonuclease/exonuclease/phosphatase family protein (370 aa)    
Predicted Functional Partners:
PBAL39_08906
Putative transmembrane rhomboid family protein (250 aa)
         
  0.900
PBAL39_08901
Putative transmembrane rhomboid family protein (287 aa)
 
     
  0.897
mutL
DNA mismatch repair protein MutL ; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex (615 aa)
              0.880
PBAL39_08891
Cysteinyl-tRNA synthetase (486 aa)
 
          0.837
PBAL39_06496
Uncharacterized protein (399 aa)
   
          0.635
PBAL39_08886
Cysteinyl-tRNA synthetase (287 aa)
              0.619
PBAL39_06021
Uncharacterized protein (205 aa)
   
          0.615
PBAL39_08210
Uncharacterized protein (179 aa)
   
          0.587
PBAL39_06906
Uncharacterized protein (218 aa)
   
          0.578
PBAL39_05513
Uncharacterized protein (818 aa)
   
          0.573
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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