Known metabolic pathways, protein complexes, signal transduction pathways, etc ... from curated databases.
Genes that are sometimes fused into single open reading frames.
STRING allows inspection of the interaction evidence for any given network. Choose any of the viewers above (disabled if not applicable in your network).
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
from curated databases
Endonuclease/exonuclease/phosphatase family protein (370 aa)
Predicted Functional Partners:
Putative transmembrane rhomboid family protein (250 aa)
Putative transmembrane rhomboid family protein (287 aa)
DNA mismatch repair protein MutL ; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex (615 aa)
Cysteinyl-tRNA synthetase (486 aa)
Uncharacterized protein (399 aa)
Cysteinyl-tRNA synthetase (287 aa)
Uncharacterized protein (205 aa)
Uncharacterized protein (179 aa)
Uncharacterized protein (218 aa)
Uncharacterized protein (818 aa)
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596 Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39