STRINGSTRING
EDM34402.1 protein (Pedobacter sp. BAL39) - STRING interaction network
"EDM34402.1" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM34402.1Uncharacterized protein; COG0665 Glycine/D-amino acid oxidases (deaminating) (424 aa)    
Predicted Functional Partners:
EDM37258.1
annotation not available (452 aa)
 
          0.879
EDM36289.1
COG5651 PPE-repeat proteins (7799 aa)
     
  0.747
EDM36369.1
Uncharacterized protein; COG0578 Glycerol-3-phosphate dehydrogenase (419 aa)
   
          0.728
EDM35101.1
annotation not available (213 aa)
   
          0.715
EDM36641.1
COG3210 Large exoproteins involved in heme utilization or adhesion (1729 aa)
     
  0.698
EDM37227.1
annotation not available (326 aa)
   
          0.693
EDM36145.1
Uncharacterized protein; COG1011 Predicted hydrolase (HAD superfamily) (202 aa)
   
          0.670
EDM35050.1
annotation not available (669 aa)
   
          0.656
EDM34454.1
annotation not available (314 aa)
   
          0.642
EDM35620.1
annotation not available (139 aa)
   
          0.639
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter sp. BAL39
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