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STRINGSTRING
EDM37258.1 protein (Pedobacter sp. BAL39) - STRING interaction network
"EDM37258.1" - annotation not available in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM37258.1annotation not available (452 aa)    
Predicted Functional Partners:
EDM34402.1
Uncharacterized protein; COG0665 Glycine/D-amino acid oxidases (deaminating) (424 aa)
 
          0.879
EDM35101.1
annotation not available (213 aa)
   
          0.762
EDM36289.1
COG5651 PPE-repeat proteins (7799 aa)
     
  0.747
EDM36145.1
Uncharacterized protein; COG1011 Predicted hydrolase (HAD superfamily) (202 aa)
   
          0.745
EDM36369.1
Uncharacterized protein; COG0578 Glycerol-3-phosphate dehydrogenase (419 aa)
   
          0.742
EDM37227.1
annotation not available (326 aa)
   
          0.728
EDM34860.1
Uncharacterized protein; COG1396 Predicted transcriptional regulators (112 aa)
   
          0.707
EDM36641.1
COG3210 Large exoproteins involved in heme utilization or adhesion (1729 aa)
     
  0.698
EDM35050.1
annotation not available (669 aa)
   
          0.695
EDM35620.1
annotation not available (139 aa)
   
          0.695
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter sp. BAL39
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