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PBAL39_08976 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_08976" - TonB-dependent outer membrane receptor in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_08976TonB-dependent outer membrane receptor (759 aa)    
Predicted Functional Partners:
PBAL39_08971
Uncharacterized protein (380 aa)
              0.780
PBAL39_21125
Uncharacterized protein (279 aa)
 
   
  0.657
pyrG
UTP--ammonia ligase ; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen (538 aa)
       
      0.633
PBAL39_08981
Transcriptional regulator (226 aa)
              0.622
PBAL39_06216
Putative transport related membrane protein (236 aa)
   
  0.595
PBAL39_05783
Biopolymer transport protein (275 aa)
   
  0.595
PBAL39_22755
Uncharacterized protein (455 aa)
   
          0.546
PBAL39_22760
HlyB/MsbA family ABC transporter (335 aa)
   
          0.545
PBAL39_22750
Outer membrane efflux protein (483 aa)
   
          0.542
PBAL39_06626
Uncharacterized protein (149 aa)
   
          0.486
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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