STRINGSTRING
PBAL39_08981 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_08981" - Transcriptional regulator in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_08981Transcriptional regulator (226 aa)    
Predicted Functional Partners:
PBAL39_08976
TonB-dependent outer membrane receptor (759 aa)
              0.622
mntH
Divalent metal cation transporter MntH ; H(+)-stimulated, divalent metal cation uptake system (619 aa)
       
  0.599
PBAL39_08971
Uncharacterized protein (380 aa)
              0.542
PBAL39_22380
ABC transporter, ATP-binding subunit ; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system (245 aa)
       
      0.527
PBAL39_08986
Uncharacterized protein (409 aa)
              0.511
PBAL39_08991
Putative SAM-dependent methyltransferase (102 aa)
              0.481
PBAL39_23707
Oxidoreductase domain protein (360 aa)
       
      0.444
PBAL39_16951
Glucose-fructose oxidoreductase (373 aa)
       
      0.444
PBAL39_14429
Putative dehydrogenase (461 aa)
       
      0.444
PBAL39_10226
Putative oxidoreductase (339 aa)
       
      0.444
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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