STRINGSTRING
recO protein (Pedobacter sp. BAL39) - STRING interaction network
"recO" - Recombination protein O in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
recORecombination protein O ; Involved in DNA repair and RecF pathway recombination (241 aa)    
Predicted Functional Partners:
PBAL39_09006
Diacylglycerol kinase ; Recycling of diacylglycerol produced during the turnover of membrane phospholipid (118 aa)
 
          0.878
PBAL39_24068
Uncharacterized protein (1473 aa)
   
          0.766
PBAL39_01022
Uncharacterized protein (893 aa)
   
          0.754
PBAL39_06496
Uncharacterized protein (399 aa)
   
          0.741
PBAL39_11562
Uncharacterized protein (542 aa)
   
          0.739
PBAL39_20620
Gliding motility-related protein possible outer membrane protein (216 aa)
   
          0.716
PBAL39_21830
Uncharacterized protein (280 aa)
   
          0.711
PBAL39_21815
Uncharacterized protein (286 aa)
   
          0.700
PBAL39_04303
Uncharacterized protein (270 aa)
   
          0.694
recX
Regulatory protein RecX ; Modulates RecA activity (185 aa)
 
          0.669
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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