STRINGSTRING
PBAL39_09021 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_09021" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_09021Uncharacterized protein (469 aa)    
Predicted Functional Partners:
PBAL39_09026
TonB-dependent receptor (1092 aa)
 
     
  0.953
PBAL39_15024
TonB-dependent receptor (1149 aa)
 
     
  0.865
PBAL39_07085
TonB-dependent receptor (952 aa)
 
     
  0.865
PBAL39_03489
TonB-dependent outer membrane receptor (489 aa)
 
          0.857
PBAL39_16866
Outer membrane protein, putative (1160 aa)
 
     
  0.856
PBAL39_06051
Putative TonB-dependent outer membrane receptor protein (1019 aa)
   
          0.623
PBAL39_03829
TonB-dependent receptor (974 aa)
   
          0.567
PBAL39_04773
Possible aminopeptidase (524 aa)
   
          0.543
PBAL39_09016
Uncharacterized protein (228 aa)
              0.535
PBAL39_10721
Putative peptidase, M28 family protein (435 aa)
   
          0.500
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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