STRINGSTRING
PBAL39_09211 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_09211" - Microcystin-dependent protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_09211Microcystin-dependent protein (198 aa)    
Predicted Functional Partners:
PBAL39_09216
Microcystin-dependent protein (185 aa)
 
       
0.881
PBAL39_09206
Phage Tail Collar (183 aa)
 
       
0.780
PBAL39_09201
Methionyl-tRNA formyltransferase (305 aa)
              0.734
PBAL39_09191
Uncharacterized protein (322 aa)
 
          0.631
PBAL39_05203
Uncharacterized protein (140 aa)
   
          0.469
PBAL39_05178
Uncharacterized protein (293 aa)
   
          0.434
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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