STRINGSTRING
PBAL39_09321 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_09321" - Apolipoprotein N-acyltransferase in Pedobacter sp. BAL39
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_09321Apolipoprotein N-acyltransferase (547 aa)    
Predicted Functional Partners:
PBAL39_09326
Uncharacterized protein (225 aa)
              0.859
PBAL39_09316
Uncharacterized protein (219 aa)
              0.840
rsmI
rRNA (cytidine-2’-O-)-methyltransferase RsmI ; Catalyzes the 2’-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA (235 aa)
              0.826
PBAL39_13552
Protein-export membrane protein SecD/SecF ; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA (987 aa)
   
   
  0.679
PBAL39_24078
Uncharacterized protein (472 aa)
   
          0.657
PBAL39_24890
Lysyl-tRNA synthetase (166 aa)
   
          0.640
PBAL39_09306
Serine-tRNA synthetase (423 aa)
              0.623
PBAL39_18289
Uncharacterized protein (146 aa)
   
          0.613
lpxC
UDP-3-O-[R-3-hydroxymyristoyl]-N-acetylglucosamine deacetylase ; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis (469 aa)
 
        0.569
PBAL39_21475
Uncharacterized protein (342 aa)
   
          0.549
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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