STRINGSTRING
PBAL39_09326 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_09326" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_09326Uncharacterized protein (225 aa)    
Predicted Functional Partners:
PBAL39_09321
Apolipoprotein N-acyltransferase (547 aa)
              0.859
PBAL39_09316
Uncharacterized protein (219 aa)
              0.840
rsmI
rRNA (cytidine-2’-O-)-methyltransferase RsmI ; Catalyzes the 2’-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA (235 aa)
              0.826
PBAL39_14319
Uncharacterized protein (196 aa)
   
          0.680
PBAL39_09306
Serine-tRNA synthetase (423 aa)
              0.623
PBAL39_07415
Uncharacterized protein (151 aa)
   
          0.538
PBAL39_10326
Uncharacterized protein (154 aa)
   
          0.441
PBAL39_15669
Uncharacterized protein (481 aa)
   
          0.435
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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