Co-purification, co-crystallization, Yeast2Hybrid, Genetic Interactions, etc ... as imported from primary sources.
Genes that are sometimes fused into single open reading frames.
Known metabolic pathways, protein complexes, signal transduction pathways, etc ... from curated databases.
Proteins whose genes are observed to be correlated in expression, across a large number of experiments.
STRING allows inspection of the interaction evidence for any given network. Choose any of the viewers above (disabled if not applicable in your network).
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
from curated databases
Uncharacterized protein (333 aa)
Predicted Functional Partners:
B-glycosyltransferase-related protein, glycosyltransferase family 2 protein (378 aa)
Oligopeptide ABC transporter, permease (363 aa)
Ribonuclease HII ; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (203 aa)
Uncharacterized protein (540 aa)
Uncharacterized protein (1473 aa)
Uncharacterized protein (271 aa)
A-glycosyltransferase-related protein, glycosyltransferase family 4 protein (400 aa)
Probable integral outer membrane protein (566 aa)
Holliday junction resolvase RuvC ; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5’-terminal phosphate and a 3’-terminal hydroxyl group (187 aa)
Uncharacterized protein (206 aa)
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596 Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39