STRINGSTRING
PBAL39_09381 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_09381" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_09381Uncharacterized protein (333 aa)    
Predicted Functional Partners:
PBAL39_09376
B-glycosyltransferase-related protein, glycosyltransferase family 2 protein (378 aa)
 
          0.966
PBAL39_09371
Oligopeptide ABC transporter, permease (363 aa)
 
          0.882
rnhB
Ribonuclease HII ; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (203 aa)
              0.805
PBAL39_05218
Uncharacterized protein (540 aa)
   
          0.778
PBAL39_24068
Uncharacterized protein (1473 aa)
   
          0.754
PBAL39_06226
Uncharacterized protein (271 aa)
   
          0.752
PBAL39_09361
A-glycosyltransferase-related protein, glycosyltransferase family 4 protein (400 aa)
              0.751
PBAL39_06206
Probable integral outer membrane protein (566 aa)
   
          0.735
ruvC
Holliday junction resolvase RuvC ; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5’-terminal phosphate and a 3’-terminal hydroxyl group (187 aa)
              0.734
PBAL39_24028
Uncharacterized protein (206 aa)
   
          0.729
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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