STRINGSTRING
PBAL39_09426 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_09426" - Putative alpha-1,6-mannanase in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_09426Putative alpha-1,6-mannanase (386 aa)    
Predicted Functional Partners:
PBAL39_09416
Putative outer membrane protein (546 aa)
 
          0.940
PBAL39_09411
Putative outer membrane protein (1112 aa)
 
          0.929
PBAL39_09421
Uncharacterized protein (373 aa)
              0.790
PBAL39_20530
Uncharacterized protein (528 aa)
   
          0.765
PBAL39_22832
Putative outer membrane protein (543 aa)
 
          0.753
PBAL39_18889
Alpha-mannosidase (879 aa)
   
          0.748
PBAL39_22837
Uncharacterized protein (1049 aa)
   
          0.714
PBAL39_18884
Uncharacterized protein (462 aa)
   
          0.686
PBAL39_18844
Putative outer membrane protein (1012 aa)
   
          0.683
PBAL39_18869
Putative outer membrane protein (589 aa)
   
          0.680
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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