STRINGSTRING
PBAL39_09431 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_09431" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_09431Uncharacterized protein (540 aa)    
Predicted Functional Partners:
PBAL39_09426
Putative alpha-1,6-mannanase (386 aa)
 
          0.629
PBAL39_18614
Probable SecDF protein-export membrane protein (488 aa)
   
          0.526
PBAL39_09421
Uncharacterized protein (373 aa)
              0.524
PBAL39_09416
Putative outer membrane protein (546 aa)
              0.498
PBAL39_09411
Putative outer membrane protein (1112 aa)
              0.478
PBAL39_02307
Putative penicillin-binding protein (798 aa)
   
          0.471
PBAL39_21025
Uncharacterized protein (255 aa)
   
          0.465
PBAL39_19639
Protein TonB ; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins (281 aa)
   
          0.415
PBAL39_02302
Putative outer membrane protein (1859 aa)
   
          0.411
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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