STRINGSTRING
PBAL39_09476 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_09476" - Gliding motility-related protein TPR repeat-containing protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_09476Gliding motility-related protein TPR repeat-containing protein (929 aa)    
Predicted Functional Partners:
PBAL39_09481
Candidate bifunctional family GT51 b-glycosyltransferase/PBP transpeptidase, candidate murein polymerase (741 aa)
              0.872
uvrC
Excinuclease ABC subunit C ; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5’ and 3’ sides of the lesion. The N-terminal half is responsible for the 3’ incision and the C-terminal half is responsible for the 5’ incision (600 aa)
              0.802
PBAL39_11637
Two-component response regulator (517 aa)
 
          0.793
PBAL39_09496
Uncharacterized protein (512 aa)
   
     
  0.790
PBAL39_04823
Gliding motility-related protein (2393 aa)
   
     
  0.790
PBAL39_09506
Lipoprotein, putative (452 aa)
   
     
  0.788
PBAL39_09501
Gliding motility-related protein (270 aa)
   
     
  0.785
PBAL39_12623
Uncharacterized protein (423 aa)
   
          0.778
PBAL39_09491
Gliding related protein possible gldN and/or gldO (290 aa)
   
          0.778
PBAL39_06586
PorT-related protein (232 aa)
   
          0.778
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
Server load: low (6%) [HD]