STRINGSTRING
PBAL39_09616 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_09616" - Outer membrane protein, OmpA family in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_09616Outer membrane protein, OmpA family (280 aa)    
Predicted Functional Partners:
PBAL39_17679
Possible outer membrane protein (174 aa)
   
 
  0.877
PBAL39_03055
Putative flagellar motor protein MotB (289 aa)
   
   
 
0.860
PBAL39_09631
Uncharacterized protein (86 aa)
              0.860
PBAL39_09626
Uncharacterized protein (132 aa)
              0.859
PBAL39_09621
Uncharacterized protein (221 aa)
              0.859
PBAL39_10426
OmpA/MotB (464 aa)
   
 
  0.854
PBAL39_11837
Protein-glutamate methylesterase (187 aa)
 
   
  0.807
PBAL39_15324
MCP methyltransferase, CheR-type (191 aa)
 
   
  0.771
PBAL39_20024
Chemotaxis response regulator (Methyltransferase) (1616 aa)
 
   
  0.698
PBAL39_01332
OmpA/MotB (448 aa)
   
 
0.683
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
Server load: low (3%) [HD]