STRINGSTRING
PBAL39_09641 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_09641" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_09641Uncharacterized protein (235 aa)    
Predicted Functional Partners:
PBAL39_09636
YozB (188 aa)
 
          0.954
PBAL39_09646
Uncharacterized protein (118 aa)
 
          0.906
PBAL39_09651
Cytochrome c oxidase, subunit III (206 aa)
 
     
  0.896
PBAL39_09686
Uncharacterized protein (403 aa)
 
          0.853
PBAL39_09696
Uncharacterized protein (178 aa)
 
          0.803
ctaB
Heme O synthase ; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group (292 aa)
 
   
  0.776
PBAL39_09681
Cytochrome c oxidase subunit 2 ; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) (411 aa)
 
 
 
  0.745
PBAL39_09701
Probable molybdopterin oxidoreductase (490 aa)
 
          0.736
PBAL39_03564
Cytochrome c oxidase assembly protein (Isoform 1) (344 aa)
   
 
  0.717
PBAL39_09671
Cytochrome c oxidase, subunit I (593 aa)
 
     
  0.698
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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