STRINGSTRING
PBAL39_09821 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_09821" - Nucleoside-diphosphate-sugar epimerase in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_09821Nucleoside-diphosphate-sugar epimerase (333 aa)    
Predicted Functional Partners:
PBAL39_09826
Phosphoserine phosphatase and phosphoglycerate dehydrogenase (D-3-phosphoglycerate dehydrogenase) fusion (432 aa)
              0.787
PBAL39_09831
Tryptophan 2,3-dioxygenase (321 aa)
              0.780
PBAL39_09816
Formiminoglutamase-related protein (393 aa)
 
          0.739
PBAL39_14699
Putative dihydroflavonol-4-reductase (319 aa)
   
          0.730
PBAL39_09836
Branched-chain-amino-acid transaminase (355 aa)
              0.576
PBAL39_02342
Putative UDP-glucose 4-epimerase (329 aa)
   
          0.553
PBAL39_05643
Possible gliding motility-related protein possible serine kinase (525 aa)
   
          0.544
PBAL39_04129
Probable carbohydrate kinase, PfkB family protein (305 aa)
   
          0.524
PBAL39_02337
Uncharacterized protein (373 aa)
 
          0.493
PBAL39_04259
Long-chain-fatty-acid--CoA ligase (Acyl-CoA synthetase) (590 aa)
 
   
    0.476
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
Server load: low (11%) [HD]