STRINGSTRING
PBAL39_09866 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_09866" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_09866Uncharacterized protein (166 aa)    
Predicted Functional Partners:
PBAL39_09871
Uncharacterized protein (387 aa)
 
          0.925
PBAL39_09861
Transcriptional regulator, sigma-54-related protein (409 aa)
              0.906
miaB
tRNA-i(6)A37 methylthiotransferase ; Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine (482 aa)
 
          0.883
PBAL39_01022
Uncharacterized protein (893 aa)
   
          0.778
PBAL39_11562
Uncharacterized protein (542 aa)
   
          0.774
PBAL39_05513
Uncharacterized protein (818 aa)
   
          0.766
PBAL39_05483
Putative outer membrane protein (431 aa)
   
          0.765
PBAL39_08574
Uncharacterized protein (1009 aa)
   
          0.764
PBAL39_06541
Putative cationic 19 kDa outer membrane protein (176 aa)
   
          0.764
PBAL39_00425
Uncharacterized protein (832 aa)
   
          0.762
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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