STRINGSTRING
PBAL39_09901 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_09901" - MgtC family protein in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_09901MgtC family protein (218 aa)    
Predicted Functional Partners:
ftsH
ATP-dependent zinc metalloprotease FtsH ; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins (697 aa)
       
      0.808
PBAL39_09896
Uncharacterized protein (309 aa)
              0.700
atpB
F-ATPase subunit 6 ; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane (377 aa)
       
      0.687
PBAL39_17824
Two-component system response regulator (225 aa)
       
 
  0.654
PBAL39_17799
Two-component system response regulator (224 aa)
       
 
  0.654
PBAL39_15184
Two-component response regulator (223 aa)
       
 
  0.654
PBAL39_19170
Band 7 protein (285 aa)
       
      0.506
PBAL39_14199
Uncharacterized protein (312 aa)
       
      0.506
PBAL39_12267
Uncharacterized protein (198 aa)
       
      0.506
PBAL39_12262
Uncharacterized protein (152 aa)
       
      0.506
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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