STRINGSTRING
PBAL39_09936 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_09936" - Putative transmembrane protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_09936Putative transmembrane protein (324 aa)    
Predicted Functional Partners:
PBAL39_09921
Uncharacterized protein (390 aa)
          0.982
PBAL39_09911
Uncharacterized protein (447 aa)
 
        0.973
PBAL39_09926
Uncharacterized protein (250 aa)
 
          0.972
PBAL39_09931
Uncharacterized protein (290 aa)
 
          0.968
PBAL39_09941
Uncharacterized protein (247 aa)
 
        0.944
PBAL39_09916
Magnesium chelatase subunit I (325 aa)
 
          0.916
PBAL39_12593
Uncharacterized protein (1842 aa)
   
          0.682
PBAL39_08946
Uncharacterized protein (424 aa)
   
          0.662
PBAL39_09981
Uncharacterized protein (901 aa)
   
          0.630
PBAL39_25005
Uncharacterized protein (638 aa)
   
          0.599
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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