STRINGSTRING
PBAL39_10006 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_10006" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_10006Uncharacterized protein (198 aa)    
Predicted Functional Partners:
PBAL39_03949
Uncharacterized protein (136 aa)
   
          0.675
PBAL39_06516
Lysine exporter protein (LYSE/YGGA) (207 aa)
   
          0.661
PBAL39_10011
TonB-dependent receptor domain protein (831 aa)
              0.635
PBAL39_10016
Pyrophosphohydrolase related protein (184 aa)
              0.559
PBAL39_25285
CHU large protein uncharacterized (251 aa)
   
          0.558
PBAL39_10021
1-acyl-sn-glycerol-3-phosphate acetyltransferase, putative (244 aa)
              0.539
PBAL39_07850
Uncharacterized protein (159 aa)
   
          0.530
PBAL39_00030
Uncharacterized protein (169 aa)
   
          0.496
PBAL39_11767
Uncharacterized protein (184 aa)
   
          0.490
PBAL39_09816
Formiminoglutamase-related protein (393 aa)
   
          0.478
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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