STRINGSTRING
PBAL39_10176 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_10176" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_10176Uncharacterized protein (430 aa)    
Predicted Functional Partners:
PBAL39_10181
RNA polymerase ECF-type sigma factor (192 aa)
 
          0.913
PBAL39_16279
Uncharacterized protein (456 aa)
   
          0.756
PBAL39_16284
Putative outer membrane protein (1190 aa)
   
          0.755
PBAL39_10186
Uncharacterized protein (629 aa)
 
          0.744
PBAL39_04338
CHU large protein uncharacterized (3896 aa)
   
          0.740
PBAL39_10071
TonB (659 aa)
   
          0.736
PBAL39_06206
Probable integral outer membrane protein (566 aa)
   
          0.734
PBAL39_09981
Uncharacterized protein (901 aa)
   
          0.729
PBAL39_23832
Putative outer membrane protein (643 aa)
   
          0.719
PBAL39_20965
Uncharacterized protein (485 aa)
   
          0.718
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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