STRINGSTRING
PBAL39_10186 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_10186" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_10186Uncharacterized protein (629 aa)    
Predicted Functional Partners:
PBAL39_10191
Uncharacterized protein (244 aa)
              0.859
guaA
Glutamine amidotransferase ; Catalyzes the synthesis of GMP from XMP (509 aa)
       
    0.803
PBAL39_10176
Uncharacterized protein (430 aa)
 
          0.744
PBAL39_10181
RNA polymerase ECF-type sigma factor (192 aa)
 
          0.717
PBAL39_10196
DEAD box-related helicase (ATP-dependent RNA helicase) (412 aa)
   
        0.623
PBAL39_02302
Putative outer membrane protein (1859 aa)
 
 
    0.534
PBAL39_10201
ATPase, AAA family protein (426 aa)
   
        0.515
PBAL39_09911
Uncharacterized protein (447 aa)
 
        0.509
PBAL39_10211
ATP-binding protein (232 aa)
              0.482
PBAL39_10206
Uncharacterized protein (492 aa)
              0.476
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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