STRINGSTRING
PBAL39_10201 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_10201" - ATPase, AAA family protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_10201ATPase, AAA family protein (426 aa)    
Predicted Functional Partners:
PBAL39_10211
ATP-binding protein (232 aa)
              0.859
PBAL39_10206
Uncharacterized protein (492 aa)
              0.859
PBAL39_11892
Aspartyl-tRNA synthetase (581 aa)
 
        0.698
recR
Recombination protein RecR ; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO (205 aa)
   
        0.676
PBAL39_10196
DEAD box-related helicase (ATP-dependent RNA helicase) (412 aa)
   
        0.651
PBAL39_01672
Putative ATP-dependent DNA helicase (729 aa)
     
 
  0.597
PBAL39_01172
ATP-dependent DNA helicase recQ (630 aa)
     
 
  0.597
ruvC
Holliday junction resolvase RuvC ; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5’-terminal phosphate and a 3’-terminal hydroxyl group (187 aa)
 
 
      0.560
PBAL39_10216
Lipoprotein PG3 (226 aa)
              0.541
PBAL39_10900
Methionyl-tRNA synthetase ; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation (716 aa)
 
        0.526
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
Server load: low (2%) [HD]