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PBAL39_10306 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_10306" - Possible tonB-linked outer membrane receptor in Pedobacter sp. BAL39
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_10306Possible tonB-linked outer membrane receptor (763 aa)    
Predicted Functional Partners:
PBAL39_05783
Biopolymer transport protein (275 aa)
 
 
  0.736
PBAL39_20725
ABC-type Fe3+-siderophores transport system (264 aa)
   
 
  0.637
PBAL39_18174
Permease protein of ABC transporter (348 aa)
 
 
  0.634
PBAL39_06216
Putative transport related membrane protein (236 aa)
   
 
  0.622
PBAL39_18259
Uncharacterized protein (249 aa)
   
          0.560
PBAL39_13095
Cation efflux system protein czcC (414 aa)
   
          0.547
PBAL39_10880
Ferrichrome iron receptor (809 aa)
   
          0.545
PBAL39_20960
Putative outer membrane protein (1104 aa)
   
          0.525
PBAL39_10011
TonB-dependent receptor domain protein (831 aa)
   
          0.511
PBAL39_09491
Gliding related protein possible gldN and/or gldO (290 aa)
   
          0.498
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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