STRINGSTRING
PBAL39_10311 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_10311" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_10311Uncharacterized protein (217 aa)    
Predicted Functional Partners:
PBAL39_10316
Probable protein kinase (432 aa)
 
          0.971
PBAL39_08796
Uncharacterized protein (292 aa)
   
          0.733
PBAL39_06101
Receiver protein of a two-component response regulator (129 aa)
   
          0.676
PBAL39_22175
Uncharacterized protein (268 aa)
   
          0.663
PBAL39_09831
Tryptophan 2,3-dioxygenase (321 aa)
   
          0.647
PBAL39_25485
Transcriptional regulator, MerR family protein (299 aa)
   
          0.576
PBAL39_10206
Uncharacterized protein (492 aa)
   
          0.573
PBAL39_25295
Uncharacterized protein (277 aa)
   
          0.564
PBAL39_24315
Uncharacterized protein (233 aa)
   
          0.558
PBAL39_25210
Possible oxidoreductase (376 aa)
   
          0.553
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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