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hisS protein (Pedobacter sp. BAL39) - STRING interaction network
"hisS" - Histidyl-tRNA synthetase in Pedobacter sp. BAL39
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hisSHistidyl-tRNA synthetase (461 aa)    
Predicted Functional Partners:
hisI
Histidine biosynthesis bifunctional protein HisIE (196 aa)
       
  0.944
PBAL39_21410
ATP phosphoribosyltransferase (283 aa)
 
  0.891
PBAL39_10900
Methionyl-tRNA synthetase ; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation (716 aa)
 
 
  0.877
PBAL39_07115
Phenylalanyl-tRNA synthetase beta subunit (799 aa)
   
   
  0.817
PBAL39_09281
Isoleucyl-tRNA synthetase ; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as ’pretransfer’ editing and involves the hydrolysis of activated Val-AMP. The other activity is designated ’posttransfer’ editing and involves deacylation of mischarged Val-tRNA(Ile) (1131 aa)
 
   
  0.807
PBAL39_24900
Lysyl-tRNA synthetase (592 aa)
     
 
  0.802
argS
Arginyl-tRNA synthetase (591 aa)
 
   
  0.772
leuS
Leucyl-tRNA synthetase (935 aa)
 
   
  0.755
PBAL39_18189
Alanyl-tRNA synthetase ; Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction- alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain (900 aa)
   
   
  0.738
pyrG
UTP--ammonia ligase ; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen (538 aa)
 
   
  0.724
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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