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PBAL39_10346 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_10346" - Putative lipoprotein in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_10346Putative lipoprotein (184 aa)    
Predicted Functional Partners:
murC
UDP-N-acetylmuramoyl-L-alanine synthetase ; Cell wall formation (451 aa)
       
    0.823
PBAL39_10970
Hemagglutinin (306 aa)
         
  0.778
PBAL39_10351
CapA family protein (368 aa)
              0.641
PBAL39_24950
UDP-N-acetylmuramate-L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (451 aa)
       
    0.567
PBAL39_01017
Putative exported N-acetylmuramoyl-L-alanine amidase (300 aa)
       
  0.546
PBAL39_01012
N-acetylmuramoyl-L-alanine amidase (280 aa)
       
  0.546
PBAL39_11852
N-acetylmuramoyl-L-alanine amidase (278 aa)
   
 
    0.524
PBAL39_10965
Hemagglutinin (212 aa)
         
  0.510
pdhA
Pyruvate dehydrogenase E1 component subunit alpha ; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) (331 aa)
              0.488
PBAL39_23958
Putative beta-glucosidase (793 aa)
         
  0.447
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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