STRINGSTRING
PBAL39_10401 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_10401" - PbpE in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_10401PbpE (405 aa)    
Predicted Functional Partners:
PBAL39_12217
B-glycosidase, glycoside hydrolase family 3 protein (574 aa)
   
  0.750
anmK
AnhMurNAc kinase ; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling (399 aa)
 
   
  0.733
PBAL39_12463
Uncharacterized protein (429 aa)
          0.721
PBAL39_23958
Putative beta-glucosidase (793 aa)
       
  0.695
PBAL39_20389
Beta-glucosidase (775 aa)
       
  0.695
PBAL39_07995
B-glucosidase, glycoside hydrolase family 3 protein (766 aa)
       
  0.695
PBAL39_03799
Beta-glucosidase (773 aa)
       
  0.695
PBAL39_11377
Penicillin-binding protein (723 aa)
   
   
  0.595
PBAL39_07355
Beta-lactamase (364 aa)
   
          0.569
PBAL39_22010
Cell division protein, penicillin-binding protein (700 aa)
     
 
  0.548
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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