STRINGSTRING
EDM37552.1 protein (Pedobacter sp. BAL39) - STRING interaction network
"EDM37552.1" - annotation not available in Pedobacter sp. BAL39
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM37552.1annotation not available (46 aa)    
Predicted Functional Partners:
EDM37551.1
Endoribonuclease L-PSP family protein; COG0251 Putative translation initiation inhibitor, yjgF family (126 aa)
              0.676
EDM37553.1
OmpA/MotB; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins; Belongs to the ompA family (464 aa)
              0.620
EDM37550.1
RarD protein; COG2962 Predicted permeases (283 aa)
              0.527
recG
ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3’- to 5’- polarity. Unwinds branched duplex DNA (Y-DNA) (701 aa)
              0.527
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter sp. BAL39
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