STRINGSTRING
EDM37566.1 protein (Pedobacter sp. BAL39) - STRING interaction network
"EDM37566.1" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM37566.1Uncharacterized protein; COG1840 ABC-type Fe3+ transport system, periplasmic component (235 aa)    
Predicted Functional Partners:
EDM35549.1
Uncharacterized protein; COG0457 FOG- TPR repeat (612 aa)
   
          0.642
EDM35186.1
annotation not available (824 aa)
   
          0.617
EDM35578.1
COG5651 PPE-repeat proteins (553 aa)
   
          0.594
EDM34304.1
COG2259 Predicted membrane protein (148 aa)
   
          0.593
EDM33981.1
Putative outer membrane protein; Probably involved in nutrient binding (513 aa)
   
          0.591
EDM35585.1
Putative outer membrane protein; Probably involved in nutrient binding (468 aa)
   
          0.590
EDM37567.1
annotation not available (141 aa)
              0.579
EDM33980.1
annotation not available (367 aa)
   
          0.567
EDM35580.1
annotation not available (513 aa)
   
          0.562
EDM35577.1
COG1524 Uncharacterized proteins of the AP superfamily (571 aa)
   
          0.560
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter sp. BAL39
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