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panD protein (Pedobacter sp. BAL39) - STRING interaction network
"panD" - Aspartate 1-decarboxylase in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
panDAspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine (116 aa)    
Predicted Functional Partners:
panC
Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate; Belongs to the pantothenate synthetase family (263 aa)
  0.999
panB
3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate; Belongs to the PanB family (271 aa)
 
   
  0.950
EDM36337.1
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate (528 aa)
   
 
  0.842
EDM34356.1
COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D (338 aa)
       
  0.834
EDM36852.1
Aminotransferase; COG0436 Aspartate/tyrosine/aromatic aminotransferase (397 aa)
       
  0.783
EDM37640.1
COG0436 Aspartate/tyrosine/aromatic aminotransferase (400 aa)
       
  0.783
EDM36445.1
Aminotransferase, class I; COG0436 Aspartate/tyrosine/aromatic aminotransferase (417 aa)
       
  0.783
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family (425 aa)
       
    0.782
EDM36437.1
COG0137 Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily (397 aa)
     
 
    0.775
pyrB
COG0540 Aspartate carbamoyltransferase, catalytic chain; Belongs to the ATCase/OTCase family (310 aa)
         
  0.775
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter sp. BAL39
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