STRINGSTRING
PBAL39_10546 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_10546" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_10546Uncharacterized protein (268 aa)    
Predicted Functional Partners:
PBAL39_21590
Possible ABC transport permease, cytochrome c biogenesis (244 aa)
   
          0.774
PBAL39_08225
Uncharacterized protein (669 aa)
   
          0.773
PBAL39_06206
Probable integral outer membrane protein (566 aa)
   
          0.765
PBAL39_10975
Uncharacterized protein (250 aa)
   
          0.753
PBAL39_22015
Uncharacterized protein (142 aa)
   
          0.751
PBAL39_24068
Uncharacterized protein (1473 aa)
   
          0.749
PBAL39_13300
Uncharacterized protein (953 aa)
   
          0.749
PBAL39_24455
Histidine kinase (1225 aa)
   
          0.728
PBAL39_01227
Uncharacterized protein (1046 aa)
   
          0.728
PBAL39_21550
Uncharacterized protein ; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH (136 aa)
   
          0.725
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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