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PBAL39_10561 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_10561" - Single-stranded DNA-binding protein in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_10561Single-stranded DNA-binding protein (142 aa)    
Predicted Functional Partners:
PBAL39_22320
DNA-directed DNA polymerase (1074 aa)
     
 
  0.917
PBAL39_06841
DNA-directed DNA polymerase (1477 aa)
     
 
  0.917
PBAL39_10556
Putative A/G-specific adenine glycosylase (350 aa)
 
   
  0.909
rpsR
30S ribosomal protein S18 ; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit (87 aa)
   
   
  0.822
PBAL39_07915
DNA polymerase III, tau and gamma subunits (624 aa)
     
 
  0.822
rpsF
30S ribosomal protein S6 ; Binds together with S18 to 16S ribosomal RNA (120 aa)
   
   
  0.811
priA
ATP-dependent helicase PriA ; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA (821 aa)
   
 
 
  0.783
dnaG
DNA primase ; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication (668 aa)
   
 
 
  0.765
PBAL39_12007
DNA polymerase I (937 aa)
 
 
  0.729
PBAL39_10551
DNA-binding protein HU (100 aa)
   
 
  0.724
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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