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PBAL39_10616 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_10616" - ABC transporter, ATP-binding/permease protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_10616ABC transporter, ATP-binding/permease protein (599 aa)    
Predicted Functional Partners:
PBAL39_16811
Outer membrane efflux protein/ immunoreative antigen (443 aa)
 
 
  0.789
PBAL39_11752
Uncharacterized protein (437 aa)
 
 
  0.765
frr
Ribosome-releasing factor ; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another (187 aa)
              0.745
PBAL39_17754
Outer membrane protein (449 aa)
   
 
  0.733
PBAL39_08170
Putative outer membrane transport/efflux protein (457 aa)
   
 
  0.733
PBAL39_04448
Outer membrane protein (477 aa)
   
 
  0.733
PBAL39_04159
Outer membrane efflux protein (443 aa)
   
 
  0.733
PBAL39_03974
Outer membrane efflux protein (444 aa)
   
 
  0.733
PBAL39_03100
RND efflux system, outer membrane lipoprotein, NodT (477 aa)
   
 
  0.733
PBAL39_14864
Probable protein secretion protein, HlyD family (400 aa)
 
 
  0.707
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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