STRINGSTRING
PBAL39_10691 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_10691" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_10691Uncharacterized protein (202 aa)    
Predicted Functional Partners:
PBAL39_10686
Uncharacterized protein (584 aa)
   
        0.862
PBAL39_10681
Uncharacterized protein (208 aa)
              0.845
PBAL39_08906
Putative transmembrane rhomboid family protein (250 aa)
   
          0.743
PBAL39_10676
Peptidase T ; Cleaves the N-terminal amino acid of tripeptides (417 aa)
     
      0.664
PBAL39_02102
Glutamate synthase, large subunit (1182 aa)
     
   
  0.645
PBAL39_08901
Putative transmembrane rhomboid family protein (287 aa)
 
          0.631
pncB
Nicotinate phosphoribosyltransferase ; Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP (392 aa)
 
   
    0.512
PBAL39_14494
Transketolase (809 aa)
     
        0.508
PBAL39_04788
2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion (658 aa)
     
        0.508
PBAL39_02242
Uncharacterized protein (263 aa)
   
        0.502
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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