STRINGSTRING
PBAL39_10716 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_10716" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_10716Uncharacterized protein (365 aa)    
Predicted Functional Partners:
PBAL39_04264
Uncharacterized protein (142 aa)
   
          0.673
PBAL39_08225
Uncharacterized protein (669 aa)
   
          0.667
PBAL39_10721
Putative peptidase, M28 family protein (435 aa)
              0.652
PBAL39_12648
Outer membrane protein (808 aa)
   
          0.639
PBAL39_06106
TPR repeat (208 aa)
   
          0.631
PBAL39_10711
NADH oxidase/rhodanese-related sulfurtransferase (106 aa)
              0.627
PBAL39_10706
Uncharacterized protein (65 aa)
              0.627
PBAL39_17674
Uncharacterized protein (235 aa)
   
          0.595
PBAL39_21975
Cell division protein FtsQ (362 aa)
   
          0.590
PBAL39_06206
Probable integral outer membrane protein (566 aa)
   
          0.573
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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