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EDM37615.1 protein (Pedobacter sp. BAL39) - STRING interaction network
"EDM37615.1" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM37615.1Uncharacterized protein; COG1530 Ribonucleases G and E (187 aa)    
Predicted Functional Partners:
EDM37614.1
COG0454 Histone acetyltransferase HPA2 and related acetyltransferases (171 aa)
 
          0.896
EDM34089.1
TPR repeat-containing protein; COG0457 FOG- TPR repeat (571 aa)
   
          0.745
EDM36456.1
Uncharacterized protein; COG0162 Tyrosyl-tRNA synthetase (140 aa)
   
          0.720
EDM38268.1
annotation not available (179 aa)
   
          0.716
EDM38267.1
annotation not available (165 aa)
   
          0.677
rsgA
Small ribosomal subunit biogenesis GTPase RsgA; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit (306 aa)
       
    0.666
thiL
Thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family (346 aa)
         
  0.651
EDM37331.1
annotation not available (219 aa)
   
          0.638
EDM37328.1
annotation not available (104 aa)
   
          0.635
EDM36087.1
5’-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5’-monophosphates; Belongs to the SurE nucleotidase family (259 aa)
       
    0.633
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter sp. BAL39
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