STRINGSTRING
PBAL39_10965 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_10965" - Hemagglutinin in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_10965Hemagglutinin (212 aa)    
Predicted Functional Partners:
PBAL39_10970
Hemagglutinin (306 aa)
 
       
0.888
PBAL39_10960
O-methyltransferase (211 aa)
              0.740
PBAL39_10975
Uncharacterized protein (250 aa)
              0.704
PBAL39_10955
Putative pre-16S rRNA nuclease ; Could be a nuclease involved in processing of the 5’-end of pre-16S rRNA (138 aa)
              0.692
PBAL39_06021
Uncharacterized protein (205 aa)
   
          0.656
PBAL39_08210
Uncharacterized protein (179 aa)
   
          0.558
PBAL39_10980
Uncharacterized protein (349 aa)
              0.547
PBAL39_08851
Uncharacterized protein (802 aa)
   
          0.543
PBAL39_13772
Aminopeptidase C (Bleomycin hydrolase) (367 aa)
   
          0.539
PBAL39_10950
DNA polymerase III gamma/tau subunit (382 aa)
              0.531
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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