STRINGSTRING
PBAL39_11020 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_11020" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_11020Uncharacterized protein (129 aa)    
Predicted Functional Partners:
PBAL39_11030
Putative transcriptional regulator (299 aa)
              0.718
PBAL39_11025
Uncharacterized protein (168 aa)
              0.718
PBAL39_11045
Putative sulfate-binding protein (306 aa)
 
          0.552
PBAL39_10885
Uncharacterized protein (224 aa)
   
          0.545
PBAL39_11035
Uncharacterized protein (362 aa)
              0.519
PBAL39_11040
Uncharacterized protein (151 aa)
              0.486
PBAL39_17454
Uncharacterized protein (133 aa)
   
          0.458
PBAL39_11050
Uncharacterized protein (249 aa)
              0.445
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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