STRINGSTRING
PBAL39_11030 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_11030" - Putative transcriptional regulator in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_11030Putative transcriptional regulator (299 aa)    
Predicted Functional Partners:
PBAL39_11025
Uncharacterized protein (168 aa)
              0.859
PBAL39_11020
Uncharacterized protein (129 aa)
              0.718
PBAL39_11055
TPR repeat (328 aa)
 
     
  0.718
PBAL39_04104
Uncharacterized protein (298 aa)
   
          0.716
PBAL39_11035
Uncharacterized protein (362 aa)
              0.612
PBAL39_11045
Putative sulfate-binding protein (306 aa)
 
          0.599
PBAL39_11040
Uncharacterized protein (151 aa)
              0.576
PBAL39_11050
Uncharacterized protein (249 aa)
              0.520
corA
Magnesium transport protein CorA ; Mediates influx of magnesium ions (372 aa)
     
      0.504
PBAL39_21285
Transcriptional regulator (320 aa)
   
   
  0.492
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
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