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EDM34527.1 protein (Pedobacter sp. BAL39) - STRING interaction network
"EDM34527.1" - Uncharacterized protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM34527.1Uncharacterized protein; COG3258 Cytochrome c (362 aa)    
Predicted Functional Partners:
EDM37772.1
Probable oxidoreductase; COG0665 Glycine/D-amino acid oxidases (deaminating) (517 aa)
     
  0.921
EDM34528.1
Uncharacterized protein (151 aa)
 
          0.912
EDM37409.1
Molybdopterin oxidoreductase, iron-sulfur binding subunit; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing (1035 aa)
   
 
  0.872
EDM34529.1
Putative sulfate-binding protein; COG0725 ABC-type molybdate transport system, periplasmic component (306 aa)
 
          0.870
EDM34530.1
Uncharacterized protein; COG4588 Accessory colonization factor AcfC, contains ABC-type periplasmic domain (249 aa)
 
          0.782
EDM38403.1
Possible secreted 5’-nucleotidase; COG0737 5’-nucleotidase/2’,3’-cyclic phosphodiesterase and related esterases; Belongs to the 5’-nucleotidase family (314 aa)
       
  0.633
EDM38623.1
annotation not available (168 aa)
     
  0.630
EDM34534.1
COG2041 Sulfite oxidase and related enzymes (398 aa)
     
  0.630
EDM35560.1
COG2041 Sulfite oxidase and related enzymes (439 aa)
     
  0.630
EDM38404.1
Putative 5’nucleotidase/UDP-sugar hydrolase; COG0737 5’-nucleotidase/2’,3’-cyclic phosphodiesterase and related esterases (254 aa)
       
  0.626
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter sp. BAL39
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