STRINGSTRING
PBAL39_11090 protein (Pedobacter sp. BAL39) - STRING interaction network
"PBAL39_11090" - Transcriptional regulator, ArsR family protein in Pedobacter sp. BAL39
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBAL39_11090Transcriptional regulator, ArsR family protein (109 aa)    
Predicted Functional Partners:
PBAL39_11105
Arsenate reductase (141 aa)
 
          0.818
PBAL39_11110
Arsenite efflux transporter (361 aa)
              0.793
PBAL39_11095
Uncharacterized protein (156 aa)
              0.784
PBAL39_11100
Phosphinothricin N-acetyltransferase (163 aa)
              0.706
PBAL39_11120
Metallophosphoesterase (245 aa)
              0.705
PBAL39_11115
Putative phosphoesterase (256 aa)
              0.705
PBAL39_15459
Arsenate reductase (123 aa)
 
          0.459
Your Current Organism:
Pedobacter sp. BAL39
NCBI taxonomy Id: 391596
Other names: P. sp. BAL39, Pedobacter BAL39, Pedobacter sp. BAL39
Server load: low (11%) [HD]